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  • br Experimental design materials and methods br Funding

    2018-10-23


    Experimental design, materials and methods
    Funding OR was supported by Arthritis Research UK, United Kingdom Grant no. 19,611, and by an EMBO travel award. This work was supported by the Oxford National Institute of Health Research (NIHR) Biomedical Research Center, the Oxford NIHR Biomedical Research Unit (PB).
    Acknowledgments
    Data We isolated the porcine peripheral blood and spleen of infected with PRRSV identified by RT-PCR and ELISA, subsets characteristics of DCs were assessed in vivo by flow cytometry (FCM) and fluorescence microscope respectively based on the key surface molecules for pDCs and mDCs. The analyzed data was presented in Fig. 1 and contained two types of data. DCs subtype analysis of porcine peripheral blood (Fig. 1a–b). DCs subtype analysis in porcine spleen (Fig. 1c–d).
    Experimental design, materials and methods
    Acknowledgments This study was funded by China Nature Science Project no.31502070 and Dr Start-up fund project of Liaoning no. 20141057. The authors thank all researchers who contributed to the work and we apologize to the researchers whose works could not be discussed here due to space limitations.
    Data One database link, three tables, and one figure are provided in this article. Methyl-seq data from SLE PBMCs segregated based on high or normal numbers of ARID3a+ Panobinostat cost was deposited in NCBI׳s GEO database under the following accession number GEO: GSE84965[2]. Tables 1 and 2 show qRT-PCR data obtained via Biomark HD for Type I IFN pathway genes from RNA derived from SLE B cells subdivided based on ARID3a levels [1], and for healthy control B cells with or without CpG induced ARID3a expression [4]. IFN signature genes are in bold. Primers for RT-PCR and qRT-PCR are given in Table 3. Fig. 1 shows the results of RT-PCR of IFNa in four EBV-transformed lymphoblastoid B cell lines [3].
    Experimental design, materials and methods
    Data This data article is referred to in the research article entitled Host factors associated with serologic inflammatory markers assessed using multiplex assays[1]. We present the percent differences in distributions of biomarkers of inflammation and immune activation associated with fixed and modifiable host characteristics, minimally-adjusted for age, blood draw time of day, and study site, using serum specimens measured longitudinally (1984–2009) from a sample of HIV-uninfected men in the Multicenter Center AIDS Cohort Study (MACS). Multivariate associations between these biomarkers and sociodemographics and risk behaviors in a sample restricted to 2001–2009 and additionally adjusted for select co-morbidities were also examined.
    Experimental design, materials and methods The MACS has been previously described; briefly, vernalization is a longstanding, prospective Panobinostat cost cohort study of men who sex with men (MSM) enrolled at four U.S. locations (Baltimore/Washington D.C., Chicago, Los Angeles, and Pittsburgh) to examine the natural and treated histories of HIV-1 infection [2,3]. Study highlights, including data collection forms, may be found at https://statepi.jhsph.edu/macs/macs.html.
    Acknowledgements Samples and data in this manuscript were collected by the Multicenter AIDS Cohort Study (MACS) with support from an American Recovery and Reinvestment Act (ARRA) supplement with centers (Principal Investigators) at: Johns Hopkins University Bloomberg School of Public Health (Joseph Margolick), U01-AI35042; Northwestern University (Steven Wolinsky), U01-AI35039; University of California, Los Angeles (Roger Detels), U01-AI35040; University of Pittsburgh (Charles Rinaldo), U01-AI35041; the Center for Analysis and Management of MACS, Johns Hopkins University Bloomberg School of Public Health (Lisa Jacobson), UM1-AI35043. The MACS is funded primarily by the National Institute of Allergy and Infectious Diseases (NIAID), with additional co-funding from the National Cancer Institute (NCI), United States. This work was also supported by the HIV Prevention Trials Network (HPTN) sponsored by the National Institute of Allergy and Infectious Diseases (NIAID), United States, National Institute on Drug Abuse, United States, National Institute of Mental Health, United States, and Office of AIDS Research, United States, of the NIH, DHHS (UM1 AI068613). Website located at http://www.statepi.jhsph.edu/macs/macs.html. The contents of this publication are solely the responsibility of the authors and do not represent the official views of the National Institutes of Health (NIH).